BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F05LP1|AL425564
(999 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1279 130 7e-30
>3x_Contig1279
Length = 6618
Score = 130 bits (65), Expect = 7e-30
Identities = 416/533 (78%)
Strand = Plus / Plus
Query: 314 ggtgaatggttaagagaaaaaggtagaaaagatttgataatataagaagatttgtaaaag 373
||||||||||| ||||| || |||||| | | |||||| || || || ||||||| |||
Sbjct: 5042 ggtgaatggttcagagacaacggtagacacgctttgatcatctacgacgatttgtccaag 5101
Query: 374 aaagaagttgaataaagtaaattgtatatattattgagaagtaaaaatggtagagaagat 433
||| |||| ||| || |||||| | ||||||||||| || | ||||||||||| |
Sbjct: 5102 caagccgttgcataccgtcaattgtctctattattgagacgtccacctggtagagaagct 5161
Query: 434 taaaatggtgatgttttataattaaattaaagattgttggaaagagatgaaaagatgtat 493
|| |||||||||||| || ||| ||| |||||||||||||||| || ||||||| |
Sbjct: 5162 taccctggtgatgttttctacttacattccagattgttggaaagagctgccaagatgtct 5221
Query: 494 gaaaagaaaggtggtggttatttgaaagatttgaaagtaattgaaaataaaggtggtgat 553
|||||||| |||||||||| ||||| | |||| ||| ||||||| | |||||||||||
Sbjct: 5222 gaaaagaacggtggtggttctttgaccgctttgccagtcattgaaactcaaggtggtgat 5281
Query: 554 gtttaagattatattaaaaaaaaagttatttaaattaaagatggtaaaattttattggaa 613
|||| | ||||||| || || ||||||| |||| |||||| ||||||| ||||||
Sbjct: 5282 gtttccgcttatattccaaccaacgttatttccattaccgatggtcaaattttcttggaa 5341
Query: 614 gatgaattgttataaaagggtataagaaaagatattaaagtaggtttgtatgtatatagt 673
| ||||||||| || |||||||| ||| || |||||| || ||||||| ||| | | ||
Sbjct: 5342 gctgaattgttctacaagggtatcagaccagctattaacgtcggtttgtctgtctctcgt 5401
Query: 674 gtaggttaagaagataaagtaaaggatttgaagaaagtagatggttaattgaagttgttt 733
|| |||| | | | |||| |||| ||||||| |||| | ||||| ||||||||||||
Sbjct: 5402 gtcggttccgccgctcaagtcaaggctttgaagcaagtcgctggttccttgaagttgttt 5461
Query: 734 ttggaaaaataaagagaagtagatgaattagaaaaattaggttaagatttggatgattat 793
|||| |||| |||||||| | || || | |||| |||| |||||||||| || |
Sbjct: 5462 ttggcccaatacagagaagtcgctgccttcgcccaattcggttccgatttggatgcttct 5521
Query: 794 aaaaagaaaaaattggatagaggtgaaagattgaaaaaattgttgaagaaaaa 846
| ||| ||| |||| ||||||||||||||||| ||||||||||| ||||
Sbjct: 5522 accaagcaaaccttggctagaggtgaaagattgacccaattgttgaagcaaaa 5574
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,108
Number of Sequences: 1807
Number of extensions: 18108
Number of successful extensions: 199
Number of sequences better than 1.0e-20: 1
length of query: 999
length of database: 10,358,551
effective HSP length: 16
effective length of query: 983
effective length of database: 10,329,639
effective search space: 10154035137
effective search space used: 10154035137
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)